Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Abcd4O89016 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Abcd4O89016 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Abcd4O89016 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Abcd4O89016 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.62■□□□□ 0.09
Abcd4O89016 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Abcd4O89016 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abcd4O89016 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.62■□□□□ 0.09
Abcd4O89016 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Abcd4O89016 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Gm11539-201ENSMUST00000119837 557 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Gm13436-201ENSMUST00000120418 567 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Gm10231-201ENSMUST00000181584 441 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Gm10175-202ENSMUST00000208752 441 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Abcd4O89016 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Abcd4O89016 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.61■□□□□ 0.09
Abcd4O89016 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Abcd4O89016 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abcd4O89016 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Abcd4O89016 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.6■□□□□ 0.09
Abcd4O89016 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Gm13559-201ENSMUST00000120476 863 ntBASIC15.6■□□□□ 0.09
Abcd4O89016 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.6■□□□□ 0.09
Abcd4O89016 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.6■□□□□ 0.09
Abcd4O89016 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.6■□□□□ 0.09
Abcd4O89016 Gm10517-202ENSMUST00000192970 758 ntBASIC15.6■□□□□ 0.09
Abcd4O89016 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abcd4O89016 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Abcd4O89016 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.59■□□□□ 0.09
Abcd4O89016 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Abcd4O89016 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.59■□□□□ 0.09
Abcd4O89016 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Gm27463-201ENSMUST00000183569 57 ntBASIC15.59■□□□□ 0.09
Abcd4O89016 Gm7889-201ENSMUST00000185591 958 ntBASIC15.59■□□□□ 0.09
Abcd4O89016 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.59■□□□□ 0.09
Abcd4O89016 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.59■□□□□ 0.09
Abcd4O89016 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.59■□□□□ 0.09
Abcd4O89016 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abcd4O89016 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Abcd4O89016 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Abcd4O89016 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.58■□□□□ 0.08
Abcd4O89016 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.58■□□□□ 0.08
Abcd4O89016 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abcd4O89016 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms