Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ShdO88834 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ShdO88834 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ShdO88834 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ShdO88834 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ShdO88834 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShdO88834 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.62■□□□□ 0.41
ShdO88834 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.62■□□□□ 0.41
ShdO88834 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.62■□□□□ 0.41
ShdO88834 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ShdO88834 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShdO88834 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ShdO88834 Gm12085-201ENSMUST00000119263 940 ntBASIC17.61■□□□□ 0.41
ShdO88834 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.61■□□□□ 0.41
ShdO88834 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ShdO88834 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.61■□□□□ 0.41
ShdO88834 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShdO88834 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
ShdO88834 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.61■□□□□ 0.41
ShdO88834 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.6■□□□□ 0.41
ShdO88834 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.6■□□□□ 0.41
ShdO88834 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ShdO88834 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShdO88834 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.59■□□□□ 0.41
ShdO88834 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ShdO88834 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShdO88834 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShdO88834 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ShdO88834 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.58■□□□□ 0.41
ShdO88834 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ShdO88834 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShdO88834 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShdO88834 Gm715-201ENSMUST00000117865 831 ntBASIC17.58■□□□□ 0.4
ShdO88834 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ShdO88834 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ShdO88834 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.58■□□□□ 0.4
ShdO88834 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShdO88834 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ShdO88834 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShdO88834 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShdO88834 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShdO88834 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms