Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm9731-201ENSMUST00000209480 747 ntBASIC18.23■□□□□ 0.51
Psmc3O88685 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Psmc3O88685 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.22■□□□□ 0.51
Psmc3O88685 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Psmc3O88685 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.22■□□□□ 0.51
Psmc3O88685 Gm37025-201ENSMUST00000195159 829 ntBASIC18.22■□□□□ 0.51
Psmc3O88685 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Psmc3O88685 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.21■□□□□ 0.51
Psmc3O88685 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Gm17971-201ENSMUST00000190239 806 ntBASIC18.21■□□□□ 0.51
Psmc3O88685 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.21■□□□□ 0.51
Psmc3O88685 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.21■□□□□ 0.51
Psmc3O88685 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.21■□□□□ 0.51
Psmc3O88685 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Psmc3O88685 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.21■□□□□ 0.5
Psmc3O88685 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Psmc3O88685 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.2■□□□□ 0.5
Psmc3O88685 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.2■□□□□ 0.5
Psmc3O88685 Il3ra-202ENSMUST00000223589 738 ntBASIC18.2■□□□□ 0.5
Psmc3O88685 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Psmc3O88685 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Psmc3O88685 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
Psmc3O88685 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Gm17808-201ENSMUST00000200859 894 ntBASIC18.19■□□□□ 0.5
Psmc3O88685 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Psmc3O88685 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Psmc3O88685 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.19■□□□□ 0.5
Psmc3O88685 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Psmc3O88685 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Psmc3O88685 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Psmc3O88685 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.18■□□□□ 0.5
Psmc3O88685 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.18■□□□□ 0.5
Psmc3O88685 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Gm17807-201ENSMUST00000186869 298 ntBASIC18.18■□□□□ 0.5
Psmc3O88685 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Psmc3O88685 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Psmc3O88685 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Psmc3O88685 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Psmc3O88685 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Psmc3O88685 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.17■□□□□ 0.5
Psmc3O88685 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Psmc3O88685 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms