Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.32■□□□□ 0.36
Dnmt3aO88508 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.32■□□□□ 0.36
Dnmt3aO88508 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dnmt3aO88508 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dnmt3aO88508 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dnmt3aO88508 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.31■□□□□ 0.36
Dnmt3aO88508 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dnmt3aO88508 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Mir5122-201ENSMUST00000175004 89 ntBASIC17.3■□□□□ 0.36
Dnmt3aO88508 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.3■□□□□ 0.36
Dnmt3aO88508 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dnmt3aO88508 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Mir8112-201ENSMUST00000184382 131 ntBASIC17.29■□□□□ 0.36
Dnmt3aO88508 Timm23-208ENSMUST00000226683 750 ntBASIC17.29■□□□□ 0.36
Dnmt3aO88508 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.29■□□□□ 0.36
Dnmt3aO88508 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dnmt3aO88508 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dnmt3aO88508 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms