Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cacna1hO88427 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.81■□□□□ 0.28
Cacna1hO88427 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Cacna1hO88427 Gm44872-201ENSMUST00000207864 420 ntBASIC16.81■□□□□ 0.28
Cacna1hO88427 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Cacna1hO88427 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cacna1hO88427 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.81■□□□□ 0.28
Cacna1hO88427 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1hO88427 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1hO88427 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1hO88427 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.8■□□□□ 0.28
Cacna1hO88427 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1hO88427 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Cacna1hO88427 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1hO88427 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.8■□□□□ 0.28
Cacna1hO88427 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1hO88427 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
Cacna1hO88427 Gm13312-201ENSMUST00000119631 718 ntBASIC16.79■□□□□ 0.28
Cacna1hO88427 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1hO88427 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1hO88427 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Gm14701-201ENSMUST00000117156 348 ntBASIC16.78■□□□□ 0.28
Cacna1hO88427 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Gm13036-201ENSMUST00000117799 748 ntBASIC16.78■□□□□ 0.28
Cacna1hO88427 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1hO88427 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1hO88427 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1hO88427 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1hO88427 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1hO88427 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.77■□□□□ 0.28
Cacna1hO88427 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1hO88427 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cacna1hO88427 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1hO88427 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1hO88427 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1hO88427 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Cacna1hO88427 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1hO88427 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1hO88427 Golph3-205ENSMUST00000228671 2842 ntBASIC16.76■□□□□ 0.27
Cacna1hO88427 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.76■□□□□ 0.27
Cacna1hO88427 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.76■□□□□ 0.27
Cacna1hO88427 Mir3113-201ENSMUST00000175478 76 ntBASIC16.76■□□□□ 0.27
Cacna1hO88427 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.76■□□□□ 0.27
Cacna1hO88427 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1hO88427 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1hO88427 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cacna1hO88427 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1hO88427 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Gm6089-201ENSMUST00000197666 938 ntBASIC16.75■□□□□ 0.27
Cacna1hO88427 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1hO88427 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cacna1hO88427 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms