Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ttc3O88196 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.1■□□□□ 0.49
Ttc3O88196 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.1■□□□□ 0.49
Ttc3O88196 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.1■□□□□ 0.49
Ttc3O88196 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Gm28033-201ENSMUST00000184224 96 ntBASIC18.1■□□□□ 0.49
Ttc3O88196 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ttc3O88196 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ttc3O88196 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Gm26039-201ENSMUST00000158152 144 ntBASIC18.1■□□□□ 0.49
Ttc3O88196 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Ttc3O88196 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc3O88196 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ttc3O88196 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ttc3O88196 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.09■□□□□ 0.49
Ttc3O88196 Phf7-203ENSMUST00000226565 1971 ntBASIC18.09■□□□□ 0.49
Ttc3O88196 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc3O88196 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc3O88196 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc3O88196 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc3O88196 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc3O88196 Gm11950-201ENSMUST00000121615 838 ntBASIC18.08■□□□□ 0.49
Ttc3O88196 Gm17807-201ENSMUST00000186869 298 ntBASIC18.08■□□□□ 0.49
Ttc3O88196 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc3O88196 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc3O88196 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Ttc3O88196 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ttc3O88196 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.08■□□□□ 0.48
Ttc3O88196 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.08■□□□□ 0.48
Ttc3O88196 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.08■□□□□ 0.48
Ttc3O88196 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc3O88196 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ttc3O88196 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.07■□□□□ 0.48
Ttc3O88196 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Ttc3O88196 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.07■□□□□ 0.48
Ttc3O88196 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc3O88196 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.06■□□□□ 0.48
Ttc3O88196 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.06■□□□□ 0.48
Ttc3O88196 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.06■□□□□ 0.48
Ttc3O88196 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
Ttc3O88196 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.06■□□□□ 0.48
Ttc3O88196 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Ttc3O88196 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.06■□□□□ 0.48
Ttc3O88196 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ttc3O88196 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc3O88196 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc3O88196 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.05■□□□□ 0.48
Ttc3O88196 Gm18421-201ENSMUST00000204122 625 ntBASIC18.05■□□□□ 0.48
Ttc3O88196 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ttc3O88196 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc3O88196 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms