Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC22.43■■□□□ 1.18
Ubr1O70481 Gm27459-201ENSMUST00000184860 107 ntBASIC22.43■■□□□ 1.18
Ubr1O70481 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Grk6-206ENSMUST00000224995 2971 ntBASIC22.43■■□□□ 1.18
Ubr1O70481 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Ubr1O70481 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Ubr1O70481 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Ubr1O70481 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr1O70481 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Iqck-206ENSMUST00000208658 2891 ntBASIC22.42■■□□□ 1.18
Ubr1O70481 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Ubr1O70481 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC22.42■■□□□ 1.18
Ubr1O70481 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC22.42■■□□□ 1.18
Ubr1O70481 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr1O70481 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC22.41■■□□□ 1.18
Ubr1O70481 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC22.41■■□□□ 1.18
Ubr1O70481 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubr1O70481 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC22.4■■□□□ 1.18
Ubr1O70481 Gm44771-201ENSMUST00000206975 626 ntBASIC22.4■■□□□ 1.18
Ubr1O70481 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubr1O70481 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Ubr1O70481 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ubr1O70481 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ubr1O70481 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
Ubr1O70481 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
Ubr1O70481 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
Ubr1O70481 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC22.39■■□□□ 1.17
Ubr1O70481 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC22.39■■□□□ 1.17
Ubr1O70481 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC22.39■■□□□ 1.17
Ubr1O70481 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Birc2-201ENSMUST00000054878 378 ntBASIC22.39■■□□□ 1.17
Ubr1O70481 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubr1O70481 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC22.38■■□□□ 1.17
Ubr1O70481 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC22.38■■□□□ 1.17
Ubr1O70481 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.38■■□□□ 1.17
Ubr1O70481 Mzt1-203ENSMUST00000227948 952 ntBASIC22.38■■□□□ 1.17
Ubr1O70481 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubr1O70481 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Ubr1O70481 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC22.38■■□□□ 1.17
Ubr1O70481 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC22.38■■□□□ 1.17
Ubr1O70481 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ubr1O70481 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ubr1O70481 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC22.37■■□□□ 1.17
Ubr1O70481 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC22.37■■□□□ 1.17
Ubr1O70481 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms