Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sigmar1O55242 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sigmar1O55242 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Sigmar1O55242 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Sigmar1O55242 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sigmar1O55242 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC11.97□□□□□ -0.49
Sigmar1O55242 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sigmar1O55242 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.97□□□□□ -0.49
Sigmar1O55242 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.96□□□□□ -0.49
Sigmar1O55242 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.96□□□□□ -0.49
Sigmar1O55242 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.96□□□□□ -0.49
Sigmar1O55242 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sigmar1O55242 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.96□□□□□ -0.49
Sigmar1O55242 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC11.96□□□□□ -0.49
Sigmar1O55242 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.96□□□□□ -0.49
Sigmar1O55242 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sigmar1O55242 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.96□□□□□ -0.5
Sigmar1O55242 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sigmar1O55242 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.96□□□□□ -0.5
Sigmar1O55242 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.96□□□□□ -0.5
Sigmar1O55242 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sigmar1O55242 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sigmar1O55242 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sigmar1O55242 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sigmar1O55242 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Sigmar1O55242 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sigmar1O55242 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sigmar1O55242 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sigmar1O55242 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sigmar1O55242 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.95□□□□□ -0.5
Sigmar1O55242 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sigmar1O55242 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms