Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ldb2O55203 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ldb2O55203 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.17■□□□□ 0.34
Ldb2O55203 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.16■□□□□ 0.34
Ldb2O55203 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ldb2O55203 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ldb2O55203 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ldb2O55203 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ldb2O55203 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.16■□□□□ 0.34
Ldb2O55203 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.16■□□□□ 0.34
Ldb2O55203 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.16■□□□□ 0.34
Ldb2O55203 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ldb2O55203 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ldb2O55203 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.15■□□□□ 0.34
Ldb2O55203 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.15■□□□□ 0.34
Ldb2O55203 Gm38027-201ENSMUST00000192315 235 ntBASIC17.15■□□□□ 0.34
Ldb2O55203 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ldb2O55203 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ldb2O55203 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ldb2O55203 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ldb2O55203 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Ldb2O55203 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ldb2O55203 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ldb2O55203 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ldb2O55203 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.14■□□□□ 0.33
Ldb2O55203 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.14■□□□□ 0.33
Ldb2O55203 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Timm23-208ENSMUST00000226683 750 ntBASIC17.14■□□□□ 0.33
Ldb2O55203 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ldb2O55203 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.14■□□□□ 0.33
Ldb2O55203 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ldb2O55203 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.13■□□□□ 0.33
Ldb2O55203 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.13■□□□□ 0.33
Ldb2O55203 Gm17661-201ENSMUST00000170317 270 ntBASIC17.13■□□□□ 0.33
Ldb2O55203 Gm37025-201ENSMUST00000195159 829 ntBASIC17.13■□□□□ 0.33
Ldb2O55203 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.13■□□□□ 0.33
Ldb2O55203 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ldb2O55203 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.13■□□□□ 0.33
Ldb2O55203 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ldb2O55203 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.12■□□□□ 0.33
Ldb2O55203 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.12■□□□□ 0.33
Ldb2O55203 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.12■□□□□ 0.33
Ldb2O55203 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms