Protein–RNA interactions for Protein: O55033

Nck2, Cytoplasmic protein NCK2, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck2O55033 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nck2O55033 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nck2O55033 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.75■□□□□ 0.75
Nck2O55033 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.74■□□□□ 0.75
Nck2O55033 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nck2O55033 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.74■□□□□ 0.75
Nck2O55033 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nck2O55033 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.73■□□□□ 0.75
Nck2O55033 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nck2O55033 Gm11950-201ENSMUST00000121615 838 ntBASIC19.73■□□□□ 0.75
Nck2O55033 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.73■□□□□ 0.75
Nck2O55033 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Nck2O55033 Mir3081-201ENSMUST00000175305 84 ntBASIC19.73■□□□□ 0.75
Nck2O55033 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nck2O55033 Il3ra-202ENSMUST00000223589 738 ntBASIC19.73■□□□□ 0.75
Nck2O55033 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nck2O55033 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.73■□□□□ 0.75
Nck2O55033 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nck2O55033 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nck2O55033 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nck2O55033 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.73■□□□□ 0.75
Nck2O55033 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nck2O55033 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nck2O55033 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.73■□□□□ 0.75
Nck2O55033 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Nck2O55033 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nck2O55033 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nck2O55033 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nck2O55033 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.72■□□□□ 0.75
Nck2O55033 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.72■□□□□ 0.75
Nck2O55033 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nck2O55033 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nck2O55033 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Nck2O55033 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nck2O55033 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.7■□□□□ 0.74
Nck2O55033 Gm37025-201ENSMUST00000195159 829 ntBASIC19.7■□□□□ 0.74
Nck2O55033 Gm9731-201ENSMUST00000209480 747 ntBASIC19.7■□□□□ 0.74
Nck2O55033 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.7■□□□□ 0.74
Nck2O55033 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nck2O55033 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nck2O55033 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nck2O55033 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.69■□□□□ 0.74
Nck2O55033 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nck2O55033 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Nck2O55033 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nck2O55033 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Nck2O55033 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nck2O55033 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nck2O55033 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nck2O55033 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nck2O55033 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nck2O55033 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms