Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.92■□□□□ 0.46
Cldn5O54942 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.92■□□□□ 0.46
Cldn5O54942 Gm18032-201ENSMUST00000222541 538 ntBASIC17.92■□□□□ 0.46
Cldn5O54942 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn5O54942 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cldn5O54942 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.92■□□□□ 0.46
Cldn5O54942 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cldn5O54942 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cldn5O54942 Rarb-207ENSMUST00000225921 2756 ntBASIC17.91■□□□□ 0.46
Cldn5O54942 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Gm16061-201ENSMUST00000122167 857 ntBASIC17.91■□□□□ 0.46
Cldn5O54942 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldn5O54942 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Cldn5O54942 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cldn5O54942 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn5O54942 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn5O54942 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Cldn5O54942 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Cldn5O54942 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.9■□□□□ 0.46
Cldn5O54942 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.9■□□□□ 0.46
Cldn5O54942 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Cldn5O54942 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn5O54942 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn5O54942 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Cldn5O54942 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn5O54942 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn5O54942 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
Cldn5O54942 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Gm6659-201ENSMUST00000174752 547 ntBASIC17.89■□□□□ 0.45
Cldn5O54942 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn5O54942 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cldn5O54942 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.88■□□□□ 0.45
Cldn5O54942 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cldn5O54942 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldn5O54942 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.88■□□□□ 0.45
Cldn5O54942 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldn5O54942 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cldn5O54942 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn5O54942 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldn5O54942 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cldn5O54942 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cldn5O54942 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cldn5O54942 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.87■□□□□ 0.45
Cldn5O54942 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Cldn5O54942 Gm22697-201ENSMUST00000175194 63 ntBASIC17.87■□□□□ 0.45
Cldn5O54942 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.87■□□□□ 0.45
Cldn5O54942 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Cldn5O54942 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.87■□□□□ 0.45
Cldn5O54942 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn5O54942 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.87■□□□□ 0.45
Cldn5O54942 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn5O54942 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn5O54942 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.87■□□□□ 0.45
Cldn5O54942 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms