Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Per1O35973 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Per1O35973 Gm18101-201ENSMUST00000215769 548 ntBASIC18.73■□□□□ 0.59
Per1O35973 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Per1O35973 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.73■□□□□ 0.59
Per1O35973 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Per1O35973 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Per1O35973 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Per1O35973 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.72■□□□□ 0.59
Per1O35973 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Gm21559-201ENSMUST00000220638 855 ntBASIC18.72■□□□□ 0.59
Per1O35973 Gm8587-201ENSMUST00000076538 843 ntBASIC18.72■□□□□ 0.59
Per1O35973 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.72■□□□□ 0.59
Per1O35973 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Per1O35973 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Per1O35973 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.71■□□□□ 0.59
Per1O35973 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Per1O35973 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Per1O35973 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.71■□□□□ 0.59
Per1O35973 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Gm18958-201ENSMUST00000174258 762 ntBASIC18.71■□□□□ 0.59
Per1O35973 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.71■□□□□ 0.59
Per1O35973 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.71■□□□□ 0.59
Per1O35973 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Per1O35973 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.71■□□□□ 0.58
Per1O35973 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Per1O35973 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Per1O35973 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.7■□□□□ 0.58
Per1O35973 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Per1O35973 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.69■□□□□ 0.58
Per1O35973 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.69■□□□□ 0.58
Per1O35973 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.69■□□□□ 0.58
Per1O35973 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.69■□□□□ 0.58
Per1O35973 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Gm10566-201ENSMUST00000086739 996 ntBASIC18.69■□□□□ 0.58
Per1O35973 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Per1O35973 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Per1O35973 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.68■□□□□ 0.58
Per1O35973 Gm27389-201ENSMUST00000183622 195 ntBASIC18.68■□□□□ 0.58
Per1O35973 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Per1O35973 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Per1O35973 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Per1O35973 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Per1O35973 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Per1O35973 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Per1O35973 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Per1O35973 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms