Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.29■□□□□ 0.36
Phox2bO35690 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Phox2bO35690 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.28■□□□□ 0.36
Phox2bO35690 Gm27702-201ENSMUST00000184512 56 ntBASIC17.28■□□□□ 0.36
Phox2bO35690 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.28■□□□□ 0.36
Phox2bO35690 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.28■□□□□ 0.36
Phox2bO35690 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.28■□□□□ 0.36
Phox2bO35690 Gm7213-201ENSMUST00000215977 950 ntBASIC17.28■□□□□ 0.36
Phox2bO35690 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.28■□□□□ 0.36
Phox2bO35690 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Phox2bO35690 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.28■□□□□ 0.36
Phox2bO35690 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Phox2bO35690 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.27■□□□□ 0.36
Phox2bO35690 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Phox2bO35690 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.27■□□□□ 0.36
Phox2bO35690 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.27■□□□□ 0.36
Phox2bO35690 Gm8000-201ENSMUST00000188378 592 ntBASIC17.27■□□□□ 0.36
Phox2bO35690 Gm43575-201ENSMUST00000196420 516 ntBASIC17.27■□□□□ 0.36
Phox2bO35690 Gm18195-201ENSMUST00000207604 706 ntBASIC17.27■□□□□ 0.36
Phox2bO35690 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Phox2bO35690 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Phox2bO35690 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Phox2bO35690 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Phox2bO35690 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Phox2bO35690 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Phox2bO35690 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Phox2bO35690 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.26■□□□□ 0.35
Phox2bO35690 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Phox2bO35690 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.26■□□□□ 0.35
Phox2bO35690 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Gm2651-201ENSMUST00000203560 838 ntBASIC17.26■□□□□ 0.35
Phox2bO35690 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.26■□□□□ 0.35
Phox2bO35690 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.26■□□□□ 0.35
Phox2bO35690 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.26■□□□□ 0.35
Phox2bO35690 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Phox2bO35690 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.25■□□□□ 0.35
Phox2bO35690 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.25■□□□□ 0.35
Phox2bO35690 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Phox2bO35690 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Phox2bO35690 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.25■□□□□ 0.35
Phox2bO35690 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.25■□□□□ 0.35
Phox2bO35690 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.25■□□□□ 0.35
Phox2bO35690 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Phox2bO35690 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
Phox2bO35690 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.25■□□□□ 0.35
Phox2bO35690 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Phox2bO35690 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Phox2bO35690 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Phox2bO35690 Mir770-201ENSMUST00000103252 94 ntBASIC17.24■□□□□ 0.35
Phox2bO35690 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms