Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx8O35652 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Gm14579-201ENSMUST00000117068 283 ntBASIC16.73■□□□□ 0.27
Lhx8O35652 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.73■□□□□ 0.27
Lhx8O35652 Gm15378-201ENSMUST00000121894 207 ntBASIC16.73■□□□□ 0.27
Lhx8O35652 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Gm2559-201ENSMUST00000201323 363 ntBASIC16.73■□□□□ 0.27
Lhx8O35652 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.73■□□□□ 0.27
Lhx8O35652 AC154828.2-201ENSMUST00000220908 1070 ntBASIC16.73■□□□□ 0.27
Lhx8O35652 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.73■□□□□ 0.27
Lhx8O35652 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.73■□□□□ 0.27
Lhx8O35652 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lhx8O35652 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC16.73■□□□□ 0.27
Lhx8O35652 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx8O35652 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lhx8O35652 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lhx8O35652 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Lhx8O35652 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.72■□□□□ 0.27
Lhx8O35652 AC124408.1-201ENSMUST00000228938 707 ntBASIC16.72■□□□□ 0.27
Lhx8O35652 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lhx8O35652 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx8O35652 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.72■□□□□ 0.27
Lhx8O35652 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.72■□□□□ 0.27
Lhx8O35652 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Lhx8O35652 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.71■□□□□ 0.27
Lhx8O35652 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lhx8O35652 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.71■□□□□ 0.27
Lhx8O35652 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.71■□□□□ 0.27
Lhx8O35652 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Lhx8O35652 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.71■□□□□ 0.27
Lhx8O35652 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx8O35652 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx8O35652 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx8O35652 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Lhx8O35652 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lhx8O35652 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.7■□□□□ 0.26
Lhx8O35652 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC16.7■□□□□ 0.26
Lhx8O35652 Gm6659-201ENSMUST00000174752 547 ntBASIC16.7■□□□□ 0.26
Lhx8O35652 Gm45166-201ENSMUST00000209073 683 ntBASIC16.7■□□□□ 0.26
Lhx8O35652 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC16.7■□□□□ 0.26
Lhx8O35652 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.7■□□□□ 0.26
Lhx8O35652 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Lhx8O35652 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Lhx8O35652 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lhx8O35652 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
Lhx8O35652 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Lhx8O35652 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.69■□□□□ 0.26
Lhx8O35652 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lhx8O35652 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx8O35652 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx8O35652 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lhx8O35652 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms