Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clcn6O35454 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clcn6O35454 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Clcn6O35454 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clcn6O35454 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clcn6O35454 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.36■□□□□ 0.53
Clcn6O35454 AC153801.1-201ENSMUST00000217904 947 ntBASIC18.36■□□□□ 0.53
Clcn6O35454 AC159205.7-201ENSMUST00000225988 692 ntBASIC18.36■□□□□ 0.53
Clcn6O35454 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.36■□□□□ 0.53
Clcn6O35454 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Clcn6O35454 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcn6O35454 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.35■□□□□ 0.53
Clcn6O35454 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Gm9440-201ENSMUST00000119667 539 ntBASIC18.35■□□□□ 0.53
Clcn6O35454 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC18.35■□□□□ 0.53
Clcn6O35454 Gm43244-201ENSMUST00000196994 1285 ntBASIC18.35■□□□□ 0.53
Clcn6O35454 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn6O35454 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clcn6O35454 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clcn6O35454 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Clcn6O35454 Gm12933-201ENSMUST00000120203 872 ntBASIC18.34■□□□□ 0.53
Clcn6O35454 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Clcn6O35454 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clcn6O35454 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.34■□□□□ 0.53
Clcn6O35454 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clcn6O35454 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn6O35454 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.34■□□□□ 0.53
Clcn6O35454 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Clcn6O35454 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Clcn6O35454 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.33■□□□□ 0.53
Clcn6O35454 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.33■□□□□ 0.53
Clcn6O35454 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn6O35454 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn6O35454 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn6O35454 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.33■□□□□ 0.52
Clcn6O35454 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn6O35454 Olfr1153-201ENSMUST00000052300 957 ntBASIC18.33■□□□□ 0.52
Clcn6O35454 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clcn6O35454 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.33■□□□□ 0.52
Clcn6O35454 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn6O35454 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn6O35454 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn6O35454 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.33■□□□□ 0.52
Clcn6O35454 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn6O35454 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms