Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Gm17661-201ENSMUST00000170317 270 ntBASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11aO35305 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11aO35305 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Gm37025-201ENSMUST00000195159 829 ntBASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Gm7791-201ENSMUST00000219066 539 ntBASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.55■□□□□ 0.56
Tnfrsf11aO35305 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf11aO35305 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tnfrsf11aO35305 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Gm9731-201ENSMUST00000209480 747 ntBASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf11aO35305 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf11aO35305 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnfrsf11aO35305 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.52■□□□□ 0.55
Tnfrsf11aO35305 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11aO35305 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11aO35305 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf11aO35305 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms