Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Gm37055-201ENSMUST00000191866 133 ntBASIC16.21■□□□□ 0.19
Cx3cl1O35188 Gm21814-202ENSMUST00000203277 873 ntBASIC16.21■□□□□ 0.19
Cx3cl1O35188 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cx3cl1O35188 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cx3cl1O35188 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cx3cl1O35188 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.2■□□□□ 0.18
Cx3cl1O35188 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.2■□□□□ 0.18
Cx3cl1O35188 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.2■□□□□ 0.18
Cx3cl1O35188 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cx3cl1O35188 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.19■□□□□ 0.18
Cx3cl1O35188 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Gm12085-201ENSMUST00000119263 940 ntBASIC16.19■□□□□ 0.18
Cx3cl1O35188 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cx3cl1O35188 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Mir6982-201ENSMUST00000184354 68 ntBASIC16.18■□□□□ 0.18
Cx3cl1O35188 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.18■□□□□ 0.18
Cx3cl1O35188 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cx3cl1O35188 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Gm24841-201ENSMUST00000158676 357 ntBASIC16.17■□□□□ 0.18
Cx3cl1O35188 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Gm3375-201ENSMUST00000203929 796 ntBASIC16.17■□□□□ 0.18
Cx3cl1O35188 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Gm5417-201ENSMUST00000079706 384 ntBASIC16.17■□□□□ 0.18
Cx3cl1O35188 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms