Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.23■□□□□ 0.35
Gm3139J3QK78 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Gm16061-201ENSMUST00000122167 857 ntBASIC17.23■□□□□ 0.35
Gm3139J3QK78 Mir5130-201ENSMUST00000175160 84 ntBASIC17.23■□□□□ 0.35
Gm3139J3QK78 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.23■□□□□ 0.35
Gm3139J3QK78 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3139J3QK78 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Gm13474-201ENSMUST00000122466 815 ntBASIC17.22■□□□□ 0.35
Gm3139J3QK78 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3139J3QK78 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3139J3QK78 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3139J3QK78 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3139J3QK78 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3139J3QK78 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3139J3QK78 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm3139J3QK78 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm3139J3QK78 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Gm3139J3QK78 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm3139J3QK78 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm3139J3QK78 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Gm3139J3QK78 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm3139J3QK78 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3139J3QK78 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.2■□□□□ 0.34
Gm3139J3QK78 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.19■□□□□ 0.34
Gm3139J3QK78 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.19■□□□□ 0.34
Gm3139J3QK78 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3139J3QK78 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.18■□□□□ 0.34
Gm3139J3QK78 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm3139J3QK78 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3139J3QK78 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms