Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr4H3BJZ2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr4H3BJZ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr4H3BJZ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdhr4H3BJZ2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr4H3BJZ2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Gm38027-201ENSMUST00000192315 235 ntBASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdhr4H3BJZ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Gm18959-201ENSMUST00000208954 655 ntBASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdhr4H3BJZ2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Gm29791-202ENSMUST00000207888 369 ntBASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdhr4H3BJZ2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr4H3BJZ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr4H3BJZ2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms