Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.7■□□□□ 0.9
NpcdF8VQB8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NpcdF8VQB8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.69■□□□□ 0.9
NpcdF8VQB8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NpcdF8VQB8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NpcdF8VQB8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.68■□□□□ 0.9
NpcdF8VQB8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NpcdF8VQB8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.67■□□□□ 0.9
NpcdF8VQB8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.67■□□□□ 0.9
NpcdF8VQB8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.67■□□□□ 0.9
NpcdF8VQB8 Gm2651-201ENSMUST00000203560 838 ntBASIC20.67■□□□□ 0.9
NpcdF8VQB8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NpcdF8VQB8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Gm15372-201ENSMUST00000120729 834 ntBASIC20.66■□□□□ 0.9
NpcdF8VQB8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.66■□□□□ 0.9
NpcdF8VQB8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.65■□□□□ 0.9
NpcdF8VQB8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.65■□□□□ 0.9
NpcdF8VQB8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms