Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh9F8VPK8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh9F8VPK8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh9F8VPK8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh9F8VPK8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Haglr-201ENSMUST00000100000 2085 ntBASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh9F8VPK8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh9F8VPK8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh9F8VPK8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms