Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ube4aE9Q735 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ube4aE9Q735 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.77■□□□□ 0.91
Ube4aE9Q735 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ube4aE9Q735 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ube4aE9Q735 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4aE9Q735 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Gm27742-201ENSMUST00000184667 60 ntBASIC20.75■□□□□ 0.91
Ube4aE9Q735 Gm17971-201ENSMUST00000190239 806 ntBASIC20.75■□□□□ 0.91
Ube4aE9Q735 Gm45328-201ENSMUST00000210942 917 ntBASIC20.75■□□□□ 0.91
Ube4aE9Q735 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.75■□□□□ 0.91
Ube4aE9Q735 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4aE9Q735 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Gm18669-201ENSMUST00000216049 778 ntBASIC20.74■□□□□ 0.91
Ube4aE9Q735 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4aE9Q735 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.73■□□□□ 0.91
Ube4aE9Q735 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Gm27357-201ENSMUST00000183754 135 ntBASIC20.73■□□□□ 0.91
Ube4aE9Q735 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.73■□□□□ 0.91
Ube4aE9Q735 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.73■□□□□ 0.91
Ube4aE9Q735 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4aE9Q735 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.72■□□□□ 0.91
Ube4aE9Q735 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4aE9Q735 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4aE9Q735 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4aE9Q735 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4aE9Q735 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms