Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Mir6956-201ENSMUST00000183598 62 ntBASIC8.36□□□□□ -1.07
Rnf213E9Q555 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Gm27628-201ENSMUST00000184911 107 ntBASIC8.36□□□□□ -1.07
Rnf213E9Q555 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Mir3113-201ENSMUST00000175478 76 ntBASIC8.36□□□□□ -1.07
Rnf213E9Q555 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Gm6089-201ENSMUST00000197666 938 ntBASIC8.36□□□□□ -1.07
Rnf213E9Q555 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Gm14127-201ENSMUST00000117906 678 ntBASIC8.36□□□□□ -1.07
Rnf213E9Q555 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rnf213E9Q555 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm7230-201ENSMUST00000173026 815 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm18856-201ENSMUST00000178096 1374 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm11336-201ENSMUST00000118168 334 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm27397-201ENSMUST00000184997 107 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm44450-201ENSMUST00000199528 114 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm6550-201ENSMUST00000187574 993 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 AC124549.3-201ENSMUST00000225541 367 ntBASIC8.35□□□□□ -1.07
Rnf213E9Q555 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Rnf213E9Q555 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rnf213E9Q555 Gm6184-201ENSMUST00000120403 1261 ntBASIC8.34□□□□□ -1.07
Rnf213E9Q555 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Gm37171-201ENSMUST00000192636 1185 ntBASIC8.34□□□□□ -1.07
Rnf213E9Q555 Gm7229-201ENSMUST00000214719 1007 ntBASIC8.34□□□□□ -1.07
Rnf213E9Q555 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rnf213E9Q555 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms