Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4lE9Q2N0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Gm7638-201ENSMUST00000121348 967 ntBASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.61□□□□□ -0.07
Cpsf4lE9Q2N0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf4lE9Q2N0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Gm17661-201ENSMUST00000170317 270 ntBASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Gm5417-201ENSMUST00000079706 384 ntBASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cpsf4lE9Q2N0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Cpsf4lE9Q2N0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4lE9Q2N0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4lE9Q2N0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4lE9Q2N0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpsf4lE9Q2N0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Cpsf4lE9Q2N0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Gm10252-201ENSMUST00000209541 832 ntBASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpsf4lE9Q2N0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms