Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tgds-204ENSMUST00000228543 1594 ntBASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28043E0CXC2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Gm12441-201ENSMUST00000121806 588 ntBASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm28043E0CXC2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28043E0CXC2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm28043E0CXC2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28043E0CXC2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms