Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.05□□□□□ -0.16
Chd6A3KFM7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.05□□□□□ -0.16
Chd6A3KFM7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.05□□□□□ -0.16
Chd6A3KFM7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.04□□□□□ -0.16
Chd6A3KFM7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Chd6A3KFM7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Gm24841-201ENSMUST00000158676 357 ntBASIC14.04□□□□□ -0.16
Chd6A3KFM7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Gm6089-201ENSMUST00000197666 938 ntBASIC14.04□□□□□ -0.16
Chd6A3KFM7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.04□□□□□ -0.16
Chd6A3KFM7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.04□□□□□ -0.16
Chd6A3KFM7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd6A3KFM7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Gm7230-201ENSMUST00000173026 815 ntBASIC14.03□□□□□ -0.16
Chd6A3KFM7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.03□□□□□ -0.16
Chd6A3KFM7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd6A3KFM7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd6A3KFM7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.02□□□□□ -0.16
Chd6A3KFM7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chd6A3KFM7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Gm11780-201ENSMUST00000136880 516 ntBASIC14.02□□□□□ -0.17
Chd6A3KFM7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.02□□□□□ -0.17
Chd6A3KFM7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chd6A3KFM7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chd6A3KFM7 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.01□□□□□ -0.17
Chd6A3KFM7 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.01□□□□□ -0.17
Chd6A3KFM7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd6A3KFM7 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.01□□□□□ -0.17
Chd6A3KFM7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms