Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.07■□□□□ 0.8
Chd5A2A8L1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Mir3081-201ENSMUST00000175305 84 ntBASIC20.07■□□□□ 0.8
Chd5A2A8L1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd5A2A8L1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chd5A2A8L1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.06■□□□□ 0.8
Chd5A2A8L1 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.06■□□□□ 0.8
Chd5A2A8L1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd5A2A8L1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd5A2A8L1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Chd5A2A8L1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.04■□□□□ 0.8
Chd5A2A8L1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd5A2A8L1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd5A2A8L1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.04■□□□□ 0.8
Chd5A2A8L1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.03■□□□□ 0.8
Chd5A2A8L1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.03■□□□□ 0.8
Chd5A2A8L1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chd5A2A8L1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Chd5A2A8L1 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.02■□□□□ 0.8
Chd5A2A8L1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd5A2A8L1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.02■□□□□ 0.79
Chd5A2A8L1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
Chd5A2A8L1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chd5A2A8L1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chd5A2A8L1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chd5A2A8L1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chd5A2A8L1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd5A2A8L1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd5A2A8L1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20■□□□□ 0.79
Chd5A2A8L1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd5A2A8L1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd5A2A8L1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd5A2A8L1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Chd5A2A8L1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd5A2A8L1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20■□□□□ 0.79
Chd5A2A8L1 AC124569.2-201ENSMUST00000225998 818 ntBASIC20■□□□□ 0.79
Chd5A2A8L1 Gm7461-201ENSMUST00000058918 827 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms