Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm40848-201ENSMUST00000221998 324 ntBASIC16.07■□□□□ 0.16
IsxA1A546 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
IsxA1A546 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IsxA1A546 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.06■□□□□ 0.16
IsxA1A546 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.06■□□□□ 0.16
IsxA1A546 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
IsxA1A546 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IsxA1A546 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
IsxA1A546 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.05■□□□□ 0.16
IsxA1A546 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
IsxA1A546 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
IsxA1A546 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.05■□□□□ 0.16
IsxA1A546 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
IsxA1A546 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
IsxA1A546 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IsxA1A546 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IsxA1A546 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.04■□□□□ 0.16
IsxA1A546 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.04■□□□□ 0.16
IsxA1A546 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IsxA1A546 Gm10493-201ENSMUST00000097270 612 ntBASIC16.04■□□□□ 0.16
IsxA1A546 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
IsxA1A546 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.04■□□□□ 0.16
IsxA1A546 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IsxA1A546 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
IsxA1A546 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
IsxA1A546 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
IsxA1A546 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.03■□□□□ 0.16
IsxA1A546 Gm11421-201ENSMUST00000122124 294 ntBASIC16.03■□□□□ 0.16
IsxA1A546 Gm38205-201ENSMUST00000192243 258 ntBASIC16.03■□□□□ 0.16
IsxA1A546 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.03■□□□□ 0.16
IsxA1A546 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
IsxA1A546 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms