Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc112A0AUP1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc112A0AUP1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc112A0AUP1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc112A0AUP1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc112A0AUP1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc112A0AUP1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc112A0AUP1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc112A0AUP1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Gm11249-201ENSMUST00000117071 859 ntBASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Gm12896-201ENSMUST00000118430 226 ntBASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc112A0AUP1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc112A0AUP1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ccdc112A0AUP1 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc112A0AUP1 Haglr-201ENSMUST00000100000 2085 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms