Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm28729A0A1B0GSW2 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm28729A0A1B0GSW2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.83■□□□□ 0.29
Gm28729A0A1B0GSW2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm28729A0A1B0GSW2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm18669-201ENSMUST00000216049 778 ntBASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm28729A0A1B0GSW2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm28729A0A1B0GSW2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Mir3081-201ENSMUST00000175305 84 ntBASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Gm27742-201ENSMUST00000184667 60 ntBASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Gm28729A0A1B0GSW2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms