Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm13168-201ENSMUST00000121771 632 ntBASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm12382-201ENSMUST00000122005 922 ntBASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.39□□□□□ -0.11
Lnp1A0A1B0GSK3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lnp1A0A1B0GSK3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Lnp1A0A1B0GSK3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lnp1A0A1B0GSK3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm15378-201ENSMUST00000121894 207 ntBASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lnp1A0A1B0GSK3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms