Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap99A0A140LIX9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Gm6345-202ENSMUST00000180900 204 ntBASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap99A0A140LIX9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.62■□□□□ 0.89
Cfap99A0A140LIX9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Gm33142-201ENSMUST00000193913 867 ntBASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cfap99A0A140LIX9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap99A0A140LIX9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap99A0A140LIX9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Gm8969-201ENSMUST00000199694 526 ntBASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Gm18101-201ENSMUST00000215769 548 ntBASIC20.58■□□□□ 0.89
Cfap99A0A140LIX9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cfap99A0A140LIX9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cfap99A0A140LIX9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cfap99A0A140LIX9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cfap99A0A140LIX9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms