Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 Psmb5-202ENSMUST00000227257 622 ntBASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC36.26■■■■□ 3.4
Gm35339A0A140LHH9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Gm35339A0A140LHH9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC36.26■■■■□ 3.39
Gm35339A0A140LHH9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC36.26■■■■□ 3.39
Gm35339A0A140LHH9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC36.26■■■■□ 3.39
Gm35339A0A140LHH9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Gm35339A0A140LHH9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC36.26■■■■□ 3.39
Gm35339A0A140LHH9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 AC159093.1-201ENSMUST00000227779 380 ntBASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Gm35339A0A140LHH9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Gm35339A0A140LHH9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Gm5264-201ENSMUST00000190584 848 ntBASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC36.23■■■■□ 3.39
Gm35339A0A140LHH9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
Gm35339A0A140LHH9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
Gm35339A0A140LHH9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Gm35339A0A140LHH9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Gm35339A0A140LHH9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC36.22■■■■□ 3.39
Gm35339A0A140LHH9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC36.22■■■■□ 3.39
Gm35339A0A140LHH9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Gm35339A0A140LHH9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Gm35339A0A140LHH9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC36.21■■■■□ 3.39
Gm35339A0A140LHH9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Gm35339A0A140LHH9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Gm35339A0A140LHH9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Gm35339A0A140LHH9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC36.2■■■■□ 3.39
Gm35339A0A140LHH9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Gm35339A0A140LHH9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Gm35339A0A140LHH9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC36.2■■■■□ 3.38
Gm35339A0A140LHH9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC36.2■■■■□ 3.38
Gm35339A0A140LHH9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Gm35339A0A140LHH9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Gm35339A0A140LHH9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Gm35339A0A140LHH9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC36.19■■■■□ 3.38
Gm35339A0A140LHH9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC36.19■■■■□ 3.38
Gm35339A0A140LHH9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Gm35339A0A140LHH9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Gm23935-201ENSMUST00000102303 57 ntBASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Gm24270-201ENSMUST00000102326 57 ntBASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Gm24245-201ENSMUST00000157318 57 ntBASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 CT009713.7-201ENSMUST00000224689 571 ntBASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC36.17■■■■□ 3.38
Gm35339A0A140LHH9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Gm10175-201ENSMUST00000086013 645 ntBASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC36.16■■■■□ 3.38
Gm35339A0A140LHH9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms