Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5580A0A0N4SVP8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm12933-201ENSMUST00000120203 872 ntBASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5580A0A0N4SVP8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5580A0A0N4SVP8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5580A0A0N4SVP8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm10138-203ENSMUST00000206952 366 ntBASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5580A0A0N4SVP8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms