Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Gm11927-201ENSMUST00000118472 759 ntBASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Gm26524-201ENSMUST00000192339 390 ntBASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv29A0A0G2LB96 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Gm10849-201ENSMUST00000100397 618 ntBASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Gm11643-201ENSMUST00000119578 864 ntBASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.34□□□□□ -0.11
Trbv29A0A0G2LB96 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv29A0A0G2LB96 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trbv29A0A0G2LB96 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Rab3c-203ENSMUST00000224180 967 ntBASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv29A0A0G2LB96 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Gm13216-201ENSMUST00000117145 591 ntBASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv29A0A0G2LB96 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms