Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav19A0A0B4J1K4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Gm38285-201ENSMUST00000192928 922 ntBASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Gm10493-201ENSMUST00000097270 612 ntBASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav19A0A0B4J1K4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.92□□□□□ -0.34
Trav19A0A0B4J1K4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav19A0A0B4J1K4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms