Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm715-201ENSMUST00000117865 831 ntBASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9-4A0A0B4J1K2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm8969-201ENSMUST00000199694 526 ntBASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9-4A0A0B4J1K2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9-4A0A0B4J1K2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9-4A0A0B4J1K2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.96□□□□□ -0.34
Trav9-4A0A0B4J1K2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav9-4A0A0B4J1K2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm12085-201ENSMUST00000119263 940 ntBASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav9-4A0A0B4J1K2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9-4A0A0B4J1K2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms