Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trbv16A0A0B4J1H3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv16A0A0B4J1H3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trbv16A0A0B4J1H3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv16A0A0B4J1H3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Rab3c-203ENSMUST00000224180 967 ntBASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv16A0A0B4J1H3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm10849-201ENSMUST00000100397 618 ntBASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm11927-201ENSMUST00000118472 759 ntBASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv16A0A0B4J1H3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv16A0A0B4J1H3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms