Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sirpb1aA0A0A6YYP6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm27405-201ENSMUST00000184201 112 ntBASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm2399-201ENSMUST00000104944 225 ntBASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm13216-201ENSMUST00000117145 591 ntBASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm10033-202ENSMUST00000211874 928 ntBASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Zfp783-201ENSMUST00000095946 670 ntBASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gm18671-201ENSMUST00000214826 683 ntBASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sirpb1aA0A0A6YYP6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms