Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Idnk-204ENSMUST00000226010 1898 ntBASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Fst-202ENSMUST00000223640 2612 ntBASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms