Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm12896-201ENSMUST00000118430 226 ntBASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav21-dv12A0A075B6C4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav21-dv12A0A075B6C4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav21-dv12A0A075B6C4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms