Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Trav17A0A075B655 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.75□□□□□ -0.21
Trav17A0A075B655 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trav17A0A075B655 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav17A0A075B655 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Gm7514-201ENSMUST00000209475 934 ntBASIC13.74□□□□□ -0.21
Trav17A0A075B655 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.74□□□□□ -0.21
Trav17A0A075B655 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav17A0A075B655 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Gm38285-201ENSMUST00000192928 922 ntBASIC13.73□□□□□ -0.21
Trav17A0A075B655 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav17A0A075B655 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.73□□□□□ -0.21
Trav17A0A075B655 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav17A0A075B655 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.72□□□□□ -0.21
Trav17A0A075B655 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.72□□□□□ -0.21
Trav17A0A075B655 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.72□□□□□ -0.21
Trav17A0A075B655 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.72□□□□□ -0.21
Trav17A0A075B655 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.72□□□□□ -0.21
Trav17A0A075B655 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms