Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Gm13836-201ENSMUST00000121159 501 ntBASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Timm23-208ENSMUST00000226683 750 ntBASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13-1A0A075B644 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Tgds-204ENSMUST00000228543 1594 ntBASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13-1A0A075B644 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13-1A0A075B644 Gm10418-201ENSMUST00000100943 576 ntBASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Gm11643-201ENSMUST00000119578 864 ntBASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Gm30025-201ENSMUST00000218555 728 ntBASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13-1A0A075B644 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms