Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-5A0A075B621 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-5A0A075B621 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6n-5A0A075B621 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-5A0A075B621 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Gm8493-201ENSMUST00000196881 489 ntBASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-5A0A075B621 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Gm14117-201ENSMUST00000122417 843 ntBASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Rps24-207ENSMUST00000224568 714 ntBASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms