Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm11643-201ENSMUST00000119578 864 ntBASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm6211-202ENSMUST00000167849 925 ntBASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-1A0A075B5Z8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-1A0A075B5Z8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 AV356131-201ENSMUST00000206201 750 ntBASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-1A0A075B5Z8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm42642-201ENSMUST00000200683 355 ntBASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms