Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Mir5130-201ENSMUST00000175160 84 ntBASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav5-1A0A075B5Z7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.83□□□□□ -0.03
Trav5-1A0A075B5Z7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5-1A0A075B5Z7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5-1A0A075B5Z7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5-1A0A075B5Z7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5-1A0A075B5Z7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5-1A0A075B5Z7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms