Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm37617-201ENSMUST00000194309 159 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm29704-201ENSMUST00000196011 253 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm45048-201ENSMUST00000207058 429 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm2446-201ENSMUST00000220144 772 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Trim54Q9ERP3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.15□□□□□ -1.74
Trim54Q9ERP3 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.15□□□□□ -1.74
Trim54Q9ERP3 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.15□□□□□ -1.74
Trim54Q9ERP3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trim54Q9ERP3 Gm24951-201ENSMUST00000102182 109 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm12739-201ENSMUST00000119769 382 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm6058-201ENSMUST00000154261 399 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm26001-201ENSMUST00000157989 103 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm29576-201ENSMUST00000188020 678 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm28354-201ENSMUST00000190904 678 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm38076-201ENSMUST00000193889 450 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm45317-201ENSMUST00000210385 223 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm18488-201ENSMUST00000215082 364 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm18116-201ENSMUST00000220920 537 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm7119-201ENSMUST00000221345 695 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm26121-201ENSMUST00000083364 162 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim54Q9ERP3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm13664-201ENSMUST00000117304 345 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm13349-201ENSMUST00000118436 411 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm15177-201ENSMUST00000120491 577 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm12045-201ENSMUST00000122122 573 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm25977-201ENSMUST00000158697 85 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm8224-201ENSMUST00000166178 497 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm19637-201ENSMUST00000185933 579 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm28597-201ENSMUST00000187664 666 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm43114-201ENSMUST00000198298 343 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm7753-201ENSMUST00000221007 867 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm23925-201ENSMUST00000082471 132 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.14□□□□□ -1.75
Trim54Q9ERP3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Mir599-201ENSMUST00000102378 88 ntBASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim54Q9ERP3 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms