Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm23096-201ENSMUST00000083447 107 ntBASIC5.23□□□□□ -1.57
Upf1Q9EPU0 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upf1Q9EPU0 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf1Q9EPU0 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Upf1Q9EPU0 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf1Q9EPU0 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Mir759-201ENSMUST00000103254 98 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm14711-201ENSMUST00000117056 217 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm11556-201ENSMUST00000120751 288 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm22514-201ENSMUST00000122547 308 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm24784-201ENSMUST00000157640 62 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm23016-201ENSMUST00000158431 62 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm26556-201ENSMUST00000180645 320 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm36964-201ENSMUST00000191876 198 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm38008-201ENSMUST00000195333 518 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm44059-201ENSMUST00000204048 351 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm45375-201ENSMUST00000210338 280 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf1Q9EPU0 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.21□□□□□ -1.57
Upf1Q9EPU0 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.21□□□□□ -1.57
Upf1Q9EPU0 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm14880-201ENSMUST00000117581 292 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm12226-201ENSMUST00000144172 876 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm24537-201ENSMUST00000157950 102 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm23666-201ENSMUST00000158053 116 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm3470-201ENSMUST00000160819 420 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm24100-201ENSMUST00000178592 79 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm24137-201ENSMUST00000180055 79 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm22391-201ENSMUST00000180356 79 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm27013-201ENSMUST00000182441 1024 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm27781-201ENSMUST00000185185 92 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm28163-201ENSMUST00000187099 325 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm37636-201ENSMUST00000193583 359 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm44373-201ENSMUST00000196112 169 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm18429-201ENSMUST00000198707 421 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm42594-201ENSMUST00000199511 246 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm44468-201ENSMUST00000199516 105 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm19147-201ENSMUST00000199622 652 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm44041-201ENSMUST00000203678 396 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm44720-201ENSMUST00000206076 260 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm44718-201ENSMUST00000206886 359 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 AC161054.1-201ENSMUST00000214319 184 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm8785-201ENSMUST00000220259 487 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Upf1Q9EPU0 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.2□□□□□ -1.58
Upf1Q9EPU0 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms