Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm22911-201ENSMUST00000177920 107 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm9830-201ENSMUST00000178509 357 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm28860-201ENSMUST00000188103 313 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm37029-201ENSMUST00000195773 239 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm45365-201ENSMUST00000209489 256 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ssu72Q9CY97 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm24045-201ENSMUST00000083113 98 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm23451-201ENSMUST00000083328 122 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm22740-201ENSMUST00000083439 109 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Rny1-201ENSMUST00000083767 112 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Gm26164-201ENSMUST00000083793 104 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ssu72Q9CY97 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ssu72Q9CY97 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Mir147-201ENSMUST00000102354 79 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm15073-201ENSMUST00000117432 634 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm13378-201ENSMUST00000117483 336 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm14890-201ENSMUST00000117660 676 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm14107-201ENSMUST00000117774 330 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm26278-201ENSMUST00000157098 132 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm24409-201ENSMUST00000157881 152 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm23545-201ENSMUST00000158205 104 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm26169-201ENSMUST00000158420 135 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm21991-201ENSMUST00000180006 508 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm42665-201ENSMUST00000202100 586 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm44162-201ENSMUST00000203543 544 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm45150-201ENSMUST00000206051 467 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm18850-201ENSMUST00000211578 388 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm45704-201ENSMUST00000212582 403 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm9309-201ENSMUST00000223537 546 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssu72Q9CY97 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Mir667-201ENSMUST00000102441 92 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm24338-201ENSMUST00000104205 127 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm13386-201ENSMUST00000117677 124 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm11325-201ENSMUST00000119967 469 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm14287-201ENSMUST00000121060 117 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm5391-201ENSMUST00000121155 613 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm8214-201ENSMUST00000172123 351 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21842-201ENSMUST00000177552 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm23864-201ENSMUST00000177607 107 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21626-201ENSMUST00000177791 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21562-201ENSMUST00000177888 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21539-201ENSMUST00000177925 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21599-201ENSMUST00000178249 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21914-201ENSMUST00000178452 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21723-201ENSMUST00000178692 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21916-201ENSMUST00000178771 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21801-201ENSMUST00000178865 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21633-201ENSMUST00000178941 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21821-201ENSMUST00000179646 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21588-201ENSMUST00000180074 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21780-201ENSMUST00000180128 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21572-201ENSMUST00000180134 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm21529-201ENSMUST00000180175 498 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm27457-201ENSMUST00000184771 156 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm29370-202ENSMUST00000187476 499 ntBASIC4.66□□□□□ -1.66
Ssu72Q9CY97 Gm29192-201ENSMUST00000190942 377 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms