Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm24439-201ENSMUST00000157894 117 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm24819-201ENSMUST00000175094 166 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21842-201ENSMUST00000177552 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm22290-201ENSMUST00000177655 107 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21626-201ENSMUST00000177791 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21562-201ENSMUST00000177888 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21539-201ENSMUST00000177925 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm22583-201ENSMUST00000178031 107 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21599-201ENSMUST00000178249 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21914-201ENSMUST00000178452 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21723-201ENSMUST00000178692 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21916-201ENSMUST00000178771 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21801-201ENSMUST00000178865 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21633-201ENSMUST00000178941 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21821-201ENSMUST00000179646 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21588-201ENSMUST00000180074 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21780-201ENSMUST00000180128 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21572-201ENSMUST00000180134 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21529-201ENSMUST00000180175 498 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm11395-201ENSMUST00000181011 499 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm11394-201ENSMUST00000181421 517 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Mir6921-201ENSMUST00000183719 80 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm29397-201ENSMUST00000185205 333 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm29370-202ENSMUST00000187476 499 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm37272-201ENSMUST00000193401 488 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm7871-201ENSMUST00000195346 618 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm43975-201ENSMUST00000203023 481 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm43945-201ENSMUST00000203595 754 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm45005-201ENSMUST00000206640 157 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 AC153646.2-201ENSMUST00000220516 109 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm6056-201ENSMUST00000221253 488 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm21937-201ENSMUST00000222825 218 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm25008-201ENSMUST00000083809 81 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm26329-201ENSMUST00000093723 110 ntBASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim11Q99PQ2 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm26376-201ENSMUST00000104784 110 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm5384-201ENSMUST00000120313 463 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm23902-201ENSMUST00000157571 134 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm27490-201ENSMUST00000184754 128 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm9443-201ENSMUST00000188406 816 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm44157-201ENSMUST00000204720 410 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm45879-201ENSMUST00000212521 392 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm29785-201ENSMUST00000217033 383 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm20368-201ENSMUST00000220716 301 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm26163-201ENSMUST00000083792 178 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim11Q99PQ2 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.48□□□□□ -1.53
Trim11Q99PQ2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.47□□□□□ -1.53
Trim11Q99PQ2 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms